Hoxd10 syntax in mouse based on all samples
Summary of Hoxd10
Gene name: Hoxd10, homeobox D10
Number of Hoxd10 PWM hits (motifs) on mouse genome: 341,641
Number of Hoxd10 PWM hits (motifs) on mouse accessible genome: 57,226
Number of summits with Hoxd10 motif per sample (min/median/max): 56 / 1,834 / 6,053
Number of summits with Hoxd10 footprinting per sample (min/median/max): 1 / 91 / 323
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (98,316 extended summits (401bp) with Hoxd10 motifs)
Footprinting-based (2,684 extended summits (401bp) with Hoxd10 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Hoxd10 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Hoxd10.
The number of Hoxd10 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Hoxd10.
View Hoxd10 in a specific mouse sample

© TFSyntax 2024. This application is designed & developed by Yongbing Zhao.