Number of Hoxd8 PWM hits (motifs) on mouse genome:
84,313
Number of Hoxd8 PWM hits (motifs) on mouse accessible genome:
13,887
Number of summits with Hoxd8 motif per sample (min/median/max):
6 / 331 / 1,655
Number of summits with Hoxd8 footprinting per sample (min/median/max):
1 / 9 / 79
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (58,625 extended summits (401bp) with Hoxd8 motifs)
Footprinting-based (1,103 extended summits (401bp) with Hoxd8 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Hoxd8 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based) Red dot is Hoxd8.
The number of Hoxd8 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based) Red dot is Hoxd8.