Number of Irx1 PWM hits (motifs) on mouse accessible genome:
12,726
Number of summits with Irx1 motif per sample (min/median/max):
24 / 470 / 1,092
Number of summits with Irx1 footprinting per sample (min/median/max):
1 / 24 / 76
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (80,825 extended summits (401bp) with Irx1 motifs)
Footprinting-based (2,360 extended summits (401bp) with Irx1 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Irx1 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based) Red dot is Irx1.
The number of Irx1 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based) Red dot is Irx1.