Number of Lhx3 PWM hits (motifs) on mouse accessible genome:
44,938
Number of summits with Lhx3 motif per sample (min/median/max):
81 / 2,503 / 6,933
Number of summits with Lhx3 footprinting per sample (min/median/max):
1 / 185 / 362
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (132,827 extended summits (401bp) with Lhx3 motifs)
Footprinting-based (4,402 extended summits (401bp) with Lhx3 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Lhx3 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based) Red dot is Lhx3.
The number of Lhx3 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based) Red dot is Lhx3.