Nfya syntax in mouse based on all samples
Summary of Nfya
Gene name: Nfya, nuclear transcription factor Y subunit alpha
Number of Nfya PWM hits (motifs) on mouse genome: 152,957
Number of Nfya PWM hits (motifs) on mouse accessible genome: 49,116
Number of summits with Nfya motif per sample (min/median/max): 2,282 / 3,756 / 9,980
Number of summits with Nfya footprinting per sample (min/median/max): 62 / 207 / 620
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (1,273,610 extended summits (401bp) with Nfya motifs)
Footprinting-based (53,339 extended summits (401bp) with Nfya footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Nfya partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Nfya.
The number of Nfya partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Nfya.
View Nfya in a specific mouse sample

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