Nkx3-1 syntax in mouse based on all samples
Summary of Nkx3-1
Gene name: Nkx3-1, NK3 homeobox 1
Number of Nkx3-1 PWM hits (motifs) on mouse genome: 357,396
Number of Nkx3-1 PWM hits (motifs) on mouse accessible genome: 81,481
Number of summits with Nkx3-1 motif per sample (min/median/max): 266 / 3,030 / 7,609
Number of summits with Nkx3-1 footprinting per sample (min/median/max): 14 / 139 / 293
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (60,747 extended summits (401bp) with Nkx3-1 motifs)
Footprinting-based (1,555 extended summits (401bp) with Nkx3-1 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Nkx3-1 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Nkx3-1.
The number of Nkx3-1 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Nkx3-1.
View Nkx3-1 in a specific mouse sample

© TFSyntax 2024. This application is designed & developed by Yongbing Zhao.