Number of Nkx6-1 PWM hits (motifs) on mouse genome:
401,801
Number of Nkx6-1 PWM hits (motifs) on mouse accessible genome:
68,818
Number of summits with Nkx6-1 motif per sample (min/median/max):
128 / 2,631 / 9,257
Number of summits with Nkx6-1 footprinting per sample (min/median/max):
1 / 143 / 537
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (169,710 extended summits (401bp) with Nkx6-1 motifs)
Footprinting-based (4,780 extended summits (401bp) with Nkx6-1 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Nkx6-1 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based) Red dot is Nkx6-1.
The number of Nkx6-1 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based) Red dot is Nkx6-1.