Number of Pax3 PWM hits (motifs) on mouse accessible genome:
16,565
Number of summits with Pax3 motif per sample (min/median/max):
256 / 1,230 / 2,350
Number of summits with Pax3 footprinting per sample (min/median/max):
5 / 58 / 133
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (60,743 extended summits (401bp) with Pax3 motifs)
Footprinting-based (1,878 extended summits (401bp) with Pax3 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Pax3 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based) Red dot is Pax3.
The number of Pax3 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based) Red dot is Pax3.