Number of Pknox2 PWM hits (motifs) on mouse genome:
197,963
Number of Pknox2 PWM hits (motifs) on mouse accessible genome:
73,767
Number of summits with Pknox2 motif per sample (min/median/max):
610 / 4,150 / 11,049
Number of summits with Pknox2 footprinting per sample (min/median/max):
41 / 268 / 729
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (830,307 extended summits (401bp) with Pknox2 motifs)
Footprinting-based (33,712 extended summits (401bp) with Pknox2 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Pknox2 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based) Red dot is Pknox2.
The number of Pknox2 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based) Red dot is Pknox2.