Number of Rarb PWM hits (motifs) on mouse accessible genome:
110,582
Number of summits with Rarb motif per sample (min/median/max):
851 / 5,356 / 14,008
Number of summits with Rarb footprinting per sample (min/median/max):
43 / 330 / 867
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (1,260,567 extended summits (401bp) with Rarb motifs)
Footprinting-based (46,776 extended summits (401bp) with Rarb footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Rarb partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based) Red dot is Rarb.
The number of Rarb partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based) Red dot is Rarb.