Rfx5 syntax in mouse based on all samples
Summary of Rfx5
Gene name: Rfx5, regulatory factor X5
Number of Rfx5 PWM hits (motifs) on mouse genome: 132,303
Number of Rfx5 PWM hits (motifs) on mouse accessible genome: 62,761
Number of summits with Rfx5 motif per sample (min/median/max): 1,127 / 3,552 / 15,449
Number of summits with Rfx5 footprinting per sample (min/median/max): 53 / 209 / 1,387
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (1,525,236 extended summits (401bp) with Rfx5 motifs)
Footprinting-based (70,946 extended summits (401bp) with Rfx5 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Rfx5 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Rfx5.
The number of Rfx5 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Rfx5.
View Rfx5 in a specific mouse sample

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