Number of Rxrg PWM hits (motifs) on mouse accessible genome:
188,702
Number of summits with Rxrg motif per sample (min/median/max):
1,243 / 7,999 / 21,323
Number of summits with Rxrg footprinting per sample (min/median/max):
53 / 399 / 1,600
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (1,334,191 extended summits (401bp) with Rxrg motifs)
Footprinting-based (40,021 extended summits (401bp) with Rxrg footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Rxrg partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based) Red dot is Rxrg.
The number of Rxrg partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based) Red dot is Rxrg.