Six6 syntax in mouse based on all samples
Summary of Six6
Gene name: Six6, SIX homeobox 6
Number of Six6 PWM hits (motifs) on mouse genome: 100,101
Number of Six6 PWM hits (motifs) on mouse accessible genome: 16,037
Number of summits with Six6 motif per sample (min/median/max): 56 / 687 / 887
Number of summits with Six6 footprinting per sample (min/median/max): 2 / 29 / 58
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (17,103 extended summits (401bp) with Six6 motifs)
Footprinting-based (431 extended summits (401bp) with Six6 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Six6 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Six6.
The number of Six6 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Six6.
View Six6 in a specific mouse sample

© TFSyntax 2024. This application is designed & developed by Yongbing Zhao.