Number of Sox2 PWM hits (motifs) on mouse accessible genome:
172,499
Number of summits with Sox2 motif per sample (min/median/max):
640 / 11,177 / 22,018
Number of summits with Sox2 footprinting per sample (min/median/max):
16 / 403 / 776
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (1,181,042 extended summits (401bp) with Sox2 motifs)
Footprinting-based (28,240 extended summits (401bp) with Sox2 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Sox2 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based) Red dot is Sox2.
The number of Sox2 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based) Red dot is Sox2.