Number of Sox3 PWM hits (motifs) on mouse accessible genome:
155,906
Number of summits with Sox3 motif per sample (min/median/max):
2,470 / 10,217 / 17,503
Number of summits with Sox3 footprinting per sample (min/median/max):
87 / 406 / 686
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (632,146 extended summits (401bp) with Sox3 motifs)
Footprinting-based (16,569 extended summits (401bp) with Sox3 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Sox3 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based) Red dot is Sox3.
The number of Sox3 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based) Red dot is Sox3.