Number of Tbr1 PWM hits (motifs) on mouse accessible genome:
28,641
Number of summits with Tbr1 motif per sample (min/median/max):
399 / 1,691 / 3,854
Number of summits with Tbr1 footprinting per sample (min/median/max):
10 / 104 / 323
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (80,213 extended summits (401bp) with Tbr1 motifs)
Footprinting-based (3,191 extended summits (401bp) with Tbr1 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Tbr1 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based) Red dot is Tbr1.
The number of Tbr1 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based) Red dot is Tbr1.