Number of Vax2 PWM hits (motifs) on mouse accessible genome:
15,980
Number of summits with Vax2 motif per sample (min/median/max):
27 / 419 / 2,706
Number of summits with Vax2 footprinting per sample (min/median/max):
6 / 23 / 88
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (46,652 extended summits (401bp) with Vax2 motifs)
Footprinting-based (1,457 extended summits (401bp) with Vax2 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Vax2 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based) Red dot is Vax2.
The number of Vax2 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based) Red dot is Vax2.