CARF syntax in human based on all samples
Summary of CARF
Gene name: CARF, calcium responsive transcription factor
Number of CARF PWM hits (motifs) on human genome: 23,032
Number of CARF PWM hits (motifs) on human accessible genome: 9,134
Number of summits with CARF motif per sample (min/median/max): 293 / 709 / 1,882
Number of summits with CARF footprinting per sample (min/median/max): 16 / 49 / 139
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (300,444 extended summits (401bp) with CARF motifs)
Footprinting-based (13,502 extended summits (401bp) with CARF footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of CARF partners on the same summit (Motif-based)
Density profile of all expressed TFs in human (Motif-based)
Red dot is CARF.
The number of CARF partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in human (Footprinting-based)
Red dot is CARF.
View CARF in a specific human sample

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