Eomes syntax in mouse based on all samples
Summary of Eomes
Gene name: Eomes, eomesodermin
Number of Eomes PWM hits (motifs) on mouse genome: 165,424
Number of Eomes PWM hits (motifs) on mouse accessible genome: 51,380
Number of summits with Eomes motif per sample (min/median/max): 533 / 2,682 / 5,387
Number of summits with Eomes footprinting per sample (min/median/max): 17 / 152 / 346
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (424,184 extended summits (401bp) with Eomes motifs)
Footprinting-based (15,856 extended summits (401bp) with Eomes footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Eomes partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Eomes.
The number of Eomes partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Eomes.
View Eomes in a specific mouse sample

© TFSyntax 2024. This application is designed & developed by Yongbing Zhao.