Etv6 syntax in mouse based on all samples
Summary of Etv6
Gene name: Etv6, ETS variant transcription factor 6
Number of Etv6 PWM hits (motifs) on mouse genome: 113,230
Number of Etv6 PWM hits (motifs) on mouse accessible genome: 54,206
Number of summits with Etv6 motif per sample (min/median/max): 2,113 / 6,157 / 11,674
Number of summits with Etv6 footprinting per sample (min/median/max): 87 / 408 / 953
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (1,867,447 extended summits (401bp) with Etv6 motifs)
Footprinting-based (106,169 extended summits (401bp) with Etv6 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Etv6 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Etv6.
The number of Etv6 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Etv6.
View Etv6 in a specific mouse sample

© TFSyntax 2024. This application is designed & developed by Yongbing Zhao.