Gabpa syntax in mouse based on all samples
Summary of Gabpa
Gene name: Gabpa, GA binding protein transcription factor subunit alpha
Number of Gabpa PWM hits (motifs) on mouse genome: 278,567
Number of Gabpa PWM hits (motifs) on mouse accessible genome: 103,958
Number of summits with Gabpa motif per sample (min/median/max): 4,320 / 10,266 / 17,646
Number of summits with Gabpa footprinting per sample (min/median/max): 177 / 549 / 1,034
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (3,635,862 extended summits (401bp) with Gabpa motifs)
Footprinting-based (157,198 extended summits (401bp) with Gabpa footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Gabpa partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Gabpa.
The number of Gabpa partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Gabpa.
View Gabpa in a specific mouse sample

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