Gbx1 syntax in mouse based on all samples
Summary of Gbx1
Gene name: Gbx1, gastrulation brain homeobox 1
Number of Gbx1 PWM hits (motifs) on mouse genome: 54,655
Number of Gbx1 PWM hits (motifs) on mouse accessible genome: 16,581
Number of summits with Gbx1 motif per sample (min/median/max): 105 / 1,913 / 3,988
Number of summits with Gbx1 footprinting per sample (min/median/max): 3 / 109 / 187
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (27,698 extended summits (401bp) with Gbx1 motifs)
Footprinting-based (1,012 extended summits (401bp) with Gbx1 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Gbx1 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Gbx1.
The number of Gbx1 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Gbx1.
View Gbx1 in a specific mouse sample

© TFSyntax 2024. This application is designed & developed by Yongbing Zhao.