Gli1 syntax in mouse based on all samples
Summary of Gli1
Gene name: Gli1, GLI family Zinc Finger 1
Number of Gli1 PWM hits (motifs) on mouse genome: 412,808
Number of Gli1 PWM hits (motifs) on mouse accessible genome: 127,186
Number of summits with Gli1 motif per sample (min/median/max): 1,985 / 8,963 / 17,341
Number of summits with Gli1 footprinting per sample (min/median/max): 126 / 486 / 1,068
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (1,261,143 extended summits (401bp) with Gli1 motifs)
Footprinting-based (43,266 extended summits (401bp) with Gli1 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Gli1 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Gli1.
The number of Gli1 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Gli1.
View Gli1 in a specific mouse sample

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