Gsc syntax in mouse based on all samples
Summary of Gsc
Gene name: Gsc, goosecoid homeobox
Number of Gsc PWM hits (motifs) on mouse genome: 47,305
Number of Gsc PWM hits (motifs) on mouse accessible genome: 16,053
Number of summits with Gsc motif per sample (min/median/max): 123 / 950 / 3,190
Number of summits with Gsc footprinting per sample (min/median/max): 9 / 53 / 152
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (36,165 extended summits (401bp) with Gsc motifs)
Footprinting-based (1,223 extended summits (401bp) with Gsc footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Gsc partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Gsc.
The number of Gsc partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Gsc.
View Gsc in a specific mouse sample

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