Gtf3a syntax in mouse based on all samples
Summary of Gtf3a
Gene name: Gtf3a, general transcription factor IIIA
Number of Gtf3a PWM hits (motifs) on mouse genome: 77,328
Number of Gtf3a PWM hits (motifs) on mouse accessible genome: 25,663
Number of summits with Gtf3a motif per sample (min/median/max): 261 / 1,224 / 3,462
Number of summits with Gtf3a footprinting per sample (min/median/max): 7 / 52 / 155
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (606,026 extended summits (401bp) with Gtf3a motifs)
Footprinting-based (16,532 extended summits (401bp) with Gtf3a footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Gtf3a partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Gtf3a.
The number of Gtf3a partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Gtf3a.
View Gtf3a in a specific mouse sample

© TFSyntax 2024. This application is designed & developed by Yongbing Zhao.