HDAC2 syntax in human based on all samples
Summary of HDAC2
Gene name: HDAC2, histone deacetylase 2
Number of HDAC2 PWM hits (motifs) on human genome: 44,062
Number of HDAC2 PWM hits (motifs) on human accessible genome: 16,869
Number of summits with HDAC2 motif per sample (min/median/max): 1,979 / 3,718 / 5,275
Number of summits with HDAC2 footprinting per sample (min/median/max): 81 / 490 / 759
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (1,259,180 extended summits (401bp) with HDAC2 motifs)
Footprinting-based (119,523 extended summits (401bp) with HDAC2 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of HDAC2 partners on the same summit (Motif-based)
Density profile of all expressed TFs in human (Motif-based)
Red dot is HDAC2.
The number of HDAC2 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in human (Footprinting-based)
Red dot is HDAC2.
View HDAC2 in a specific human sample

© TFSyntax 2024. This application is designed & developed by Yongbing Zhao.