Hmg20b syntax in mouse based on all samples
Summary of Hmg20b
Gene name: Hmg20b, high mobility group 20B
Number of Hmg20b PWM hits (motifs) on mouse genome: 123,542
Number of Hmg20b PWM hits (motifs) on mouse accessible genome: 13,529
Number of summits with Hmg20b motif per sample (min/median/max): 7 / 174 / 1,472
Number of summits with Hmg20b footprinting per sample (min/median/max): 1 / 6 / 178
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (206,109 extended summits (401bp) with Hmg20b motifs)
Footprinting-based (3,927 extended summits (401bp) with Hmg20b footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Hmg20b partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Hmg20b.
The number of Hmg20b partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Hmg20b.
View Hmg20b in a specific mouse sample

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