Number of Hoxa10 PWM hits (motifs) on mouse genome:
262,251
Number of Hoxa10 PWM hits (motifs) on mouse accessible genome:
52,025
Number of summits with Hoxa10 motif per sample (min/median/max):
142 / 1,481 / 7,820
Number of summits with Hoxa10 footprinting per sample (min/median/max):
2 / 65 / 430
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (130,501 extended summits (401bp) with Hoxa10 motifs)
Footprinting-based (3,745 extended summits (401bp) with Hoxa10 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Hoxa10 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based) Red dot is Hoxa10.
The number of Hoxa10 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based) Red dot is Hoxa10.