Number of Hoxa2 PWM hits (motifs) on mouse genome:
61,386
Number of Hoxa2 PWM hits (motifs) on mouse accessible genome:
19,828
Number of summits with Hoxa2 motif per sample (min/median/max):
65 / 741 / 4,197
Number of summits with Hoxa2 footprinting per sample (min/median/max):
3 / 43 / 173
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (114,347 extended summits (401bp) with Hoxa2 motifs)
Footprinting-based (3,862 extended summits (401bp) with Hoxa2 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Hoxa2 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based) Red dot is Hoxa2.
The number of Hoxa2 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based) Red dot is Hoxa2.