Number of Hoxb5 PWM hits (motifs) on mouse genome:
55,980
Number of Hoxb5 PWM hits (motifs) on mouse accessible genome:
16,688
Number of summits with Hoxb5 motif per sample (min/median/max):
64 / 704 / 3,022
Number of summits with Hoxb5 footprinting per sample (min/median/max):
2 / 35 / 129
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (87,087 extended summits (401bp) with Hoxb5 motifs)
Footprinting-based (2,638 extended summits (401bp) with Hoxb5 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Hoxb5 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based) Red dot is Hoxb5.
The number of Hoxb5 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based) Red dot is Hoxb5.