Hoxc10 syntax in mouse based on all samples
Summary of Hoxc10
Gene name: Hoxc10, homeobox C10
Number of Hoxc10 PWM hits (motifs) on mouse genome: 221,725
Number of Hoxc10 PWM hits (motifs) on mouse accessible genome: 38,968
Number of summits with Hoxc10 motif per sample (min/median/max): 130 / 1,448 / 5,965
Number of summits with Hoxc10 footprinting per sample (min/median/max): 1 / 65 / 308
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (76,179 extended summits (401bp) with Hoxc10 motifs)
Footprinting-based (2,242 extended summits (401bp) with Hoxc10 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Hoxc10 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Hoxc10.
The number of Hoxc10 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Hoxc10.
View Hoxc10 in a specific mouse sample

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