Number of Hoxc8 PWM hits (motifs) on mouse genome:
164,169
Number of Hoxc8 PWM hits (motifs) on mouse accessible genome:
39,939
Number of summits with Hoxc8 motif per sample (min/median/max):
118 / 1,513 / 5,011
Number of summits with Hoxc8 footprinting per sample (min/median/max):
2 / 77 / 267
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (110,769 extended summits (401bp) with Hoxc8 motifs)
Footprinting-based (3,412 extended summits (401bp) with Hoxc8 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Hoxc8 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based) Red dot is Hoxc8.
The number of Hoxc8 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based) Red dot is Hoxc8.