Hoxd12 syntax in mouse based on all samples
Summary of Hoxd12
Gene name: Hoxd12, homeobox D12
Number of Hoxd12 PWM hits (motifs) on mouse genome: 23,564
Number of Hoxd12 PWM hits (motifs) on mouse accessible genome: 6,221
Number of summits with Hoxd12 motif per sample (min/median/max): 244 / 690 / 1,299
Number of summits with Hoxd12 footprinting per sample (min/median/max): 7 / 43 / 69
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (10,397 extended summits (401bp) with Hoxd12 motifs)
Footprinting-based (419 extended summits (401bp) with Hoxd12 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Hoxd12 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Hoxd12.
The number of Hoxd12 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Hoxd12.
View Hoxd12 in a specific mouse sample

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