Irf9 syntax in mouse based on all samples
Summary of Irf9
Gene name: Irf9, interferon regulatory factor 9
Number of Irf9 PWM hits (motifs) on mouse genome: 300,595
Number of Irf9 PWM hits (motifs) on mouse accessible genome: 66,043
Number of summits with Irf9 motif per sample (min/median/max): 286 / 3,101 / 7,149
Number of summits with Irf9 footprinting per sample (min/median/max): 3 / 139 / 441
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (1,336,959 extended summits (401bp) with Irf9 motifs)
Footprinting-based (42,113 extended summits (401bp) with Irf9 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Irf9 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Irf9.
The number of Irf9 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Irf9.
View Irf9 in a specific mouse sample

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