Number of Lhx1 PWM hits (motifs) on mouse accessible genome:
19,775
Number of summits with Lhx1 motif per sample (min/median/max):
63 / 1,115 / 3,077
Number of summits with Lhx1 footprinting per sample (min/median/max):
1 / 73 / 204
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (83,899 extended summits (401bp) with Lhx1 motifs)
Footprinting-based (2,574 extended summits (401bp) with Lhx1 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Lhx1 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based) Red dot is Lhx1.
The number of Lhx1 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based) Red dot is Lhx1.