Number of Lhx9 PWM hits (motifs) on mouse accessible genome:
8,378
Number of summits with Lhx9 motif per sample (min/median/max):
15 / 418 / 1,652
Number of summits with Lhx9 footprinting per sample (min/median/max):
2 / 24 / 66
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (46,761 extended summits (401bp) with Lhx9 motifs)
Footprinting-based (1,160 extended summits (401bp) with Lhx9 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Lhx9 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based) Red dot is Lhx9.
The number of Lhx9 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based) Red dot is Lhx9.