Lmo2 syntax in mouse based on all samples
Summary of Lmo2
Gene name: Lmo2, LIM domain only 2
Number of Lmo2 PWM hits (motifs) on mouse genome: 170,932
Number of Lmo2 PWM hits (motifs) on mouse accessible genome: 59,298
Number of summits with Lmo2 motif per sample (min/median/max): 1,118 / 3,849 / 9,934
Number of summits with Lmo2 footprinting per sample (min/median/max): 81 / 258 / 628
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (1,289,377 extended summits (401bp) with Lmo2 motifs)
Footprinting-based (56,226 extended summits (401bp) with Lmo2 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Lmo2 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Lmo2.
The number of Lmo2 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Lmo2.
View Lmo2 in a specific mouse sample

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