Number of Nfia PWM hits (motifs) on mouse accessible genome:
70,642
Number of summits with Nfia motif per sample (min/median/max):
566 / 3,694 / 22,927
Number of summits with Nfia footprinting per sample (min/median/max):
10 / 168 / 1,427
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (1,185,503 extended summits (401bp) with Nfia motifs)
Footprinting-based (49,103 extended summits (401bp) with Nfia footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Nfia partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based) Red dot is Nfia.
The number of Nfia partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based) Red dot is Nfia.