Nkx6-2 syntax in mouse based on all samples
Summary of Nkx6-2
Gene name: Nkx6-2, NK6 homeobox 2
Number of Nkx6-2 PWM hits (motifs) on mouse genome: 50,477
Number of Nkx6-2 PWM hits (motifs) on mouse accessible genome: 9,741
Number of summits with Nkx6-2 motif per sample (min/median/max): 8 / 232 / 1,400
Number of summits with Nkx6-2 footprinting per sample (min/median/max): 1 / 15 / 95
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (45,965 extended summits (401bp) with Nkx6-2 motifs)
Footprinting-based (1,386 extended summits (401bp) with Nkx6-2 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Nkx6-2 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Nkx6-2.
The number of Nkx6-2 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Nkx6-2.
View Nkx6-2 in a specific mouse sample

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