PBX1 syntax in human based on all samples
Summary of PBX1
Gene name: PBX1, PBX homeobox 1
Number of PBX1 PWM hits (motifs) on human genome: 404,822
Number of PBX1 PWM hits (motifs) on human accessible genome: 99,787
Number of summits with PBX1 motif per sample (min/median/max): 1,834 / 4,963 / 14,359
Number of summits with PBX1 footprinting per sample (min/median/max): 115 / 345 / 1,149
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (1,118,013 extended summits (401bp) with PBX1 motifs)
Footprinting-based (45,141 extended summits (401bp) with PBX1 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of PBX1 partners on the same summit (Motif-based)
Density profile of all expressed TFs in human (Motif-based)
Red dot is PBX1.
The number of PBX1 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in human (Footprinting-based)
Red dot is PBX1.
View PBX1 in a specific human sample

© TFSyntax 2024. This application is designed & developed by Yongbing Zhao.