PRRX1 syntax in human based on all samples
Summary of PRRX1
Gene name: PRRX1, paired related homeobox 1
Number of PRRX1 PWM hits (motifs) on human genome: 114,680
Number of PRRX1 PWM hits (motifs) on human accessible genome: 18,409
Number of summits with PRRX1 motif per sample (min/median/max): 156 / 772 / 2,306
Number of summits with PRRX1 footprinting per sample (min/median/max): 5 / 34 / 162
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (140,918 extended summits (401bp) with PRRX1 motifs)
Footprinting-based (3,435 extended summits (401bp) with PRRX1 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of PRRX1 partners on the same summit (Motif-based)
Density profile of all expressed TFs in human (Motif-based)
Red dot is PRRX1.
The number of PRRX1 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in human (Footprinting-based)
Red dot is PRRX1.
View PRRX1 in a specific human sample

© TFSyntax 2024. This application is designed & developed by Yongbing Zhao.