Pax1 syntax in mouse based on all samples
Summary of Pax1
Gene name: Pax1, paired box 1
Number of Pax1 PWM hits (motifs) on mouse genome: 34,536
Number of Pax1 PWM hits (motifs) on mouse accessible genome: 12,927
Number of summits with Pax1 motif per sample (min/median/max): 278 / 1,066 / 2,004
Number of summits with Pax1 footprinting per sample (min/median/max): 20 / 37 / 85
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (18,853 extended summits (401bp) with Pax1 motifs)
Footprinting-based (565 extended summits (401bp) with Pax1 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Pax1 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Pax1.
The number of Pax1 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Pax1.
View Pax1 in a specific mouse sample

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