Number of Pax5 PWM hits (motifs) on mouse accessible genome:
237,769
Number of summits with Pax5 motif per sample (min/median/max):
7,120 / 17,812 / 36,137
Number of summits with Pax5 footprinting per sample (min/median/max):
393 / 1,053 / 2,188
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (2,233,979 extended summits (401bp) with Pax5 motifs)
Footprinting-based (116,204 extended summits (401bp) with Pax5 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Pax5 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based) Red dot is Pax5.
The number of Pax5 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based) Red dot is Pax5.