Pknox1 syntax in mouse based on all samples
Summary of Pknox1
Gene name: Pknox1, PBX/knotted 1 homeobox 1
Number of Pknox1 PWM hits (motifs) on mouse genome: 264,726
Number of Pknox1 PWM hits (motifs) on mouse accessible genome: 94,916
Number of summits with Pknox1 motif per sample (min/median/max): 934 / 4,054 / 14,081
Number of summits with Pknox1 footprinting per sample (min/median/max): 56 / 262 / 824
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (1,822,557 extended summits (401bp) with Pknox1 motifs)
Footprinting-based (76,681 extended summits (401bp) with Pknox1 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Pknox1 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Pknox1.
The number of Pknox1 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Pknox1.
View Pknox1 in a specific mouse sample

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