Prdm4 syntax in mouse based on all samples
Summary of Prdm4
Gene name: Prdm4, PR/SET domain 4
Number of Prdm4 PWM hits (motifs) on mouse genome: 100,354
Number of Prdm4 PWM hits (motifs) on mouse accessible genome: 31,624
Number of summits with Prdm4 motif per sample (min/median/max): 243 / 1,320 / 4,254
Number of summits with Prdm4 footprinting per sample (min/median/max): 6 / 72 / 233
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (690,937 extended summits (401bp) with Prdm4 motifs)
Footprinting-based (21,761 extended summits (401bp) with Prdm4 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Prdm4 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Prdm4.
The number of Prdm4 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Prdm4.
View Prdm4 in a specific mouse sample

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