Prrx1 syntax in mouse based on all samples
Summary of Prrx1
Gene name: Prrx1, paired related homeobox 1
Number of Prrx1 PWM hits (motifs) on mouse genome: 41,488
Number of Prrx1 PWM hits (motifs) on mouse accessible genome: 9,803
Number of summits with Prrx1 motif per sample (min/median/max): 16 / 318 / 1,968
Number of summits with Prrx1 footprinting per sample (min/median/max): 1 / 15 / 84
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (80,633 extended summits (401bp) with Prrx1 motifs)
Footprinting-based (1,913 extended summits (401bp) with Prrx1 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Prrx1 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Prrx1.
The number of Prrx1 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Prrx1.
View Prrx1 in a specific mouse sample

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