Rax syntax in mouse based on all samples
Summary of Rax
Gene name: Rax, retina and anterior neural fold homeobox
Number of Rax PWM hits (motifs) on mouse genome: 61,353
Number of Rax PWM hits (motifs) on mouse accessible genome: 18,309
Number of summits with Rax motif per sample (min/median/max): 154 / 811 / 3,604
Number of summits with Rax footprinting per sample (min/median/max): 4 / 39 / 184
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (20,429 extended summits (401bp) with Rax motifs)
Footprinting-based (722 extended summits (401bp) with Rax footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Rax partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Rax.
The number of Rax partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Rax.
View Rax in a specific mouse sample

© TFSyntax 2024. This application is designed & developed by Yongbing Zhao.