Rfx1 syntax in mouse based on all samples
Summary of Rfx1
Gene name: Rfx1, regulatory factor X1
Number of Rfx1 PWM hits (motifs) on mouse genome: 277,407
Number of Rfx1 PWM hits (motifs) on mouse accessible genome: 120,151
Number of summits with Rfx1 motif per sample (min/median/max): 3,055 / 8,466 / 25,568
Number of summits with Rfx1 footprinting per sample (min/median/max): 149 / 515 / 2,110
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (3,465,603 extended summits (401bp) with Rfx1 motifs)
Footprinting-based (157,476 extended summits (401bp) with Rfx1 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Rfx1 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Rfx1.
The number of Rfx1 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Rfx1.
View Rfx1 in a specific mouse sample

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