Rorb syntax in mouse based on all samples
Summary of Rorb
Gene name: Rorb, RAR related orphan receptor B
Number of Rorb PWM hits (motifs) on mouse genome: 94,061
Number of Rorb PWM hits (motifs) on mouse accessible genome: 30,901
Number of summits with Rorb motif per sample (min/median/max): 263 / 1,753 / 4,268
Number of summits with Rorb footprinting per sample (min/median/max): 9 / 105 / 265
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (169,983 extended summits (401bp) with Rorb motifs)
Footprinting-based (6,548 extended summits (401bp) with Rorb footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Rorb partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Rorb.
The number of Rorb partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Rorb.
View Rorb in a specific mouse sample

© TFSyntax 2024. This application is designed & developed by Yongbing Zhao.