Smarcc1 syntax in mouse based on all samples
Summary of Smarcc1
Gene name: Smarcc1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1
Number of Smarcc1 PWM hits (motifs) on mouse genome: 84,040
Number of Smarcc1 PWM hits (motifs) on mouse accessible genome: 47,172
Number of summits with Smarcc1 motif per sample (min/median/max): 397 / 2,650 / 15,568
Number of summits with Smarcc1 footprinting per sample (min/median/max): 21 / 149 / 954
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (996,917 extended summits (401bp) with Smarcc1 motifs)
Footprinting-based (46,722 extended summits (401bp) with Smarcc1 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Smarcc1 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Smarcc1.
The number of Smarcc1 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Smarcc1.
View Smarcc1 in a specific mouse sample

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